St. Cloud State University is organized into six autonomous colleges and schools with two schools embedded in each of the colleges.
The following individuals and units report directly to the Provost and Vice President for Academic Affairs.
| Associate Provost for Faculty and Student Affairs, Interim | Ajay Panicker |
| Assistant Provost for Institutional Effectiveness and Academic Quality, Interim | Michele Mumm |
| Executive Director of Academic Resources, Interim | Brandon Johnson |
| University Curriculum Coordinator | Bill Cook |
| College of Education and Learning Design | Jennifer Mueller, Dean |
| College of Health and Wellness Professions | Shonda Craft, Dean |
| College of Liberal Arts | Mark Springer, Dean |
| School of the Arts | Raymond Philippot, Associate Dean |
| College of Science and Engineering | Adel Ali, Dean |
| School of Computing, Engineering, and Environment | Maureen Tubbiola, Associate Dean |
| Herberger Business School | Katherina Pattit, Dean |
| School of Graduate Studies | Claudia Tomany, Associate Provost for Research and Sponsored Programs and Dean of Graduate Studies |
| School of Public Affairs | King Banaian, Dean |
| University College | Feng-Ling Johnson, Associate Vice President for Student Success and Dean of University College |
| Center for Continuing Studies | |
| Center for Excellence in Teaching and Learning | Michelle Kukoleca Hammes, Director, Interim |
| Center for Holocaust and Genocide Education | Julie Pitzer, Director, Interim |
| Center for International Studies | Shahzad Ahmad, Associate Vice President, Interim |
| Office of Research and Sponsored Programs | Claudia Tomany, Associate Provost for Research and Sponsored Programs and Dean of Graduate Studies |
| SCSU Online |
David Blanchard, Director of SCSU Online and Distance Learning, Interim |
| University Library | Rhonda Huisman, Dean |